20150902–09033 PI Retreat
-台中清新會館-陳老師述說從前 NCI與衛生署歷史: 第一次三年20多篇paper, 第二次、第三次…-台北美兆健檢中心 -wondering thought: BEX1/LDOC1; miR-329 and miR410
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LabLog-柏廷篇
LogID Title Initial Date AE801 Compare Serum folate concn in OPMD patient and summary MAF in SNPs of folate-mediated one carbon metabolism PTL 2015/11/9 AE802 Calculate and compare the MAF of rs1801133 and rs1801131 from sample PTL 2015/11/13 AE803 Calculate and compare the MAF of rs2274976, rs1805087, rs1801394 and rs1979277 from sample PTL 2015/11/17 AE804 PTL AE805 PTL #1由 poting 在 三,
IRB 問與答 2014年題庫
IRB 問與答 2014年題庫 由 sufang 在 二, 06/09/2015 – 09:09 發表 Oral Cancer IRB Oral Cancer Su-Fang Lin <sflin1@gmail.com> Jun 5 Reply to 張書銘, 陳雅雯, 江士昇, 夏興國 Dear All, 我PP計畫的IRB審查回來了, 兩個reviewer都有一點問題. 總評皆為「修正後推薦」。想請問大家先前有沒有碰到類似的問題, 其正解為何? 先謝謝大家的幫忙! 之後如果大家不介意的話, 我們是不是把各自的問題集合在一起、弄成一本題庫? 具IRB同仁說 送出去的審委不一樣、同樣的申請件, 碰到的問題都不一樣。 Thanks again! Su-Fang (ext 35107) (餘刪, 見下6/8回覆) Ya-Wen Chen Jun 5 Reply to me, 張書銘, 江士昇, 夏興國 以下是我遇到的問題及回答, 素芳的問題與我的問題有相似, 重點是(簡易審查核對表)提及使用合法生物資料庫..簡易審查核對表我更改成接續前階段研究之後續資料分析(湘如建議). 委員A本研究係以成大醫院口腔癌組織進行相關研究，其第16頁(簡易審查核對表)提及，係使用合法生物資料庫，請主持人具體說明該檢體來自於成大醫院哪個生物資料庫?回覆：更改成: 僅限於接續前階段研究之後續資料分析 其所使用之檢體系匿名化或去連結化?回覆： 去連結化 第24頁(免研究參與者同意申請書)所附成大醫院兩份IRB證書之相關研究計畫主題，是否與本計畫主題相關?回覆：是, 本計畫是以HR-97-100
EBV and NGS
由 sufang 在 四, 06/04/2015 – 13:38 發表 Pre-published EVKV NGS 3552_2012_12_Whole genome sequencing of the Akata and Mutu Epstein-Barr virus (EBV) strains.pdf 3577_2011_11_Direct sequencing and characterization of a clinical isolate of Epstein-Barr virus from nasopharyngeal carcinoma tissue by using next-generation sequencing technology 3964_2014_02_Integrated mRNA and microRNA transcriptome sequencing characterizes sequence variants and mRNA–microRNA regulatory
2015/05 Methylation Marker Paper from JAMA Oncology
Correlation of Smoking-Associated DNA Methylation Changes in Buccal Cells With DNA Methylation Changes in Epithelial Cancer JAMA Oncol. Published online May 14, 2015. doi:10.1001/jamaoncol.2015.1053 Andrew E. Teschendorff, PhD1,2; Zhen Yang, PhD2; Andrew Wong, PhD3; Christodoulos P. Pipinikas, PhD4; Yinming Jiao, MSc2; Allison Jones, BSc5; Shahzia Anjum, PhD5; Rebecca Hardy, PhD3; Helga B. Salvesen, MD6; Christina Thirlwell, PhD4; Samuel
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2016/105年待辦事項
2016/105年待辦事項 由 sufang 在 三, 05/27/2015 – 08:45 發表 Pre-published Gene Fusion HOK Lin Lab Oral Cancer Paper Submission 宛樺: DDR1 overexpression in OSCC 嬿如: EBV Rta mediated DNA methylation in the host genome FGFR Gene Fusion related (玉蓮、奕宏) 1. FGFR2 gene fusion in cholangiocarcinoma (Post 連結) 2. FGFR3 gene fusion in oral cancer
Reading Notes
Wiki Biological action (2015/05/17) In many Asian cultures, the areca nut is chewed along with betel leaf to obtain a stimulating effect. Arecoline is the primary active ingredient responsible for the central nervous system effects of the areca nut. Arecoline has been compared to nicotine; however, nicotine acts primarily on the nicotinic acetylcholine receptor. Arecoline is known to be a partial agonist of muscarinic acetylcholine M1,
2015-05-05 Journal Club
各位老師學長學姊大家好: 我是下周二要在journal club報告的學生-Yi-Hong 題目: Massive parallel sequencing uncovers actionable FGFR2–PPHLN1 fusion and ARAF mutations in intrahepatic cholangiocarcinoma本文文章 supplementary information
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RBBS
RBBS由 sufang 在 三, 04/01/2015 – 09:00 發表 Pre-published RBBS 須細讀, 台大擬用此法screen HNSCC patients. Start: 04/01/2015