需要一個安靜的地方寫paper!
家裡、辦公室、宿舍竟然沒有一處令人安心，是我的問題吧 😓
2020
Reviewer 3: It will be nice if you can share the codes… (CAF index MS)
哎呦我的媽，醜醜的code見得了人嗎? Difference between R MarkDown and R NoteBook NoteBook多一個 .html檔，多麽邪魔 Daniel 太好了! 這一篇有望被接受! 我是安裝Gossamer bioinformatics suite (https://github.com/data61/gossamer)使用裡面的Xenome模組 (https://github.com/data61/gossamer/blob/master/docs/xenome.md) Xenome 我需要給一個workflow的 script file 裡面包含所有指令跟檔案路徑嗎? XenofilteR 應該可以直接給GitHub連結 (https://github.com/PeeperLab/XenofilteR) 對, 可以建立一個github account for this publication. 有兩種方式, 1, 直接fork (像給link, 可以追朔源頭) 別人的project, 2. 另外寫一套流程 python code for pipeline 把別人的程式碼放/包進來, 我之前都是一個個下指令, 沒有寫成腳本script 執行 這是我以前的github account …. :p https://github.com/danielsu0523 都是直接implement成web application, Epimolas有放在江博士的github上
Reviewer 3: It will be nice if you can share the codes… (CAF index MS) Read More »
Reviewer 3: It will be very useful of you can share your codes…
哎呦我的媽，醜醜的code見得了人嗎? Difference between R MarkDown and R NoteBook NoteBook多一個 .html檔，多麽邪魔 Daniel 太好了! 這一篇有望被接受! 我是安裝Gossamer bioinformatics suite (https://github.com/data61/gossamer)使用裡面的Xenome模組 (https://github.com/data61/gossamer/blob/master/docs/xenome.md) Xenome 我需要給一個workflow的 script file 裡面包含所有指令跟檔案路徑嗎? XenofilteR 應該可以直接給GitHub連結 (https://github.com/PeeperLab/XenofilteR) 對, 可以建立一個github account for this publication. 有兩種方式, 1, 直接fork (像給link, 可以追朔源頭) 別人的project, 2. 另外寫一套流程 python code for pipeline 把別人的程式碼放/包進來, 我之前都是一個個下指令, 沒有寫成腳本script 執行 這是我以前的github account …. :p https://github.com/danielsu0523 都是直接implement成web application, Epimolas有放在江博士的github上
Reviewer 3: It will be very useful of you can share your codes… Read More »
2020 ASCO20 Virtual Meeting (05/29-05/31 Scientific)
2020 Presidential Address: Unite and Conquer: Accelerating Progress Together Test Your Login in Advance Don’t wait until the sessions start to log in for the first time. Make sure you’ll be able to access meeting content by logging in to the ASCO20 Virtual test page today. For assistance, please contact ASCO Customer Service from 7:00
2020 ASCO20 Virtual Meeting (05/29-05/31 Scientific) Read More »
2020 ASCO20 Virtual Meeting (08/08-08/10 Education)
2020 ASCO20 Virtual (HomePage) Access Meeting Materials Abstracts for the ASCO20 Virtual Scientific Program are now available on ASCO Meeting Library or as downloadable PDFs. 💖💜🙏🙆🙆🙆 Meeting Videos and Slides will be available on ASCO Meeting Library for all registered attendees beginning May 29. Read ASCO Daily News for updates before, during, and after the Scientific Program. Browse the 2020 ASCO Educational Book for
2020 ASCO20 Virtual Meeting (08/08-08/10 Education) Read More »
2020 AACR Virtual Meeting – II (06/22 ~ 06/24)
Back to search page (較簡潔) Home for virtual meeting II (https://aacr20vm2.onlineeventpro.freeman.com/)(MyAACR sflin1 | Gn9) 06/22 10:00-12:20 AMSESSION PL01 – Opening Plenary Session: Turning Science into Lifesaving Care
2020 AACR Virtual Meeting – II (06/22 ~ 06/24) Read More »
2020 AACR Virtual Meeting – I (04/27 ~ 04/28)
AACR 2020 Virtual Meeting I Virtual Meeting Announcement site (find abstracts easier in this site)Search by “tumor microenvironment” —-> by Date —-> 04/27 nothing interesting 04/28 (https://www.abstractsonline.com/pp8/#!/9045/session/838)Evaluating Cancer Genomics from Normal Tissues through Evolution to Metastatic Disease 5702 – A spatially resolved single cell atlas of the human breast (Tapsi Kumar & Kai Kessenbrock) Abstract The human
2020 AACR Virtual Meeting – I (04/27 ~ 04/28) Read More »
2020/02/06 Journal Club
Programmable bacteria induce durable tumor regression and systemic antitumor immunity. (PubMed Link)
2020/02/06 Journal Club Read More »
2020/01/16 Journal Club
c-Jun overexpression in CAR T cells induces exhaustion resistance. (PubMed)
2020/01/16 Journal Club Read More »
2020/01/09 Journal Club and 2020/01/05 MOST109
An Interleukin-25-Mediated Autoregulatory Circuit in Keratinocytes Plays a Pivotal Role in Psoriatic Skin Inflammation. (PubMed) 2020/01/05 與多數上皮癌一樣，口腔癌的發生是漸進性的，口腔癌患者在確診前的一段時間，常先出現扁平苔蘚、紅白斑、口腔粘膜下纖維化、上皮發育不良型增生或過度角化、上皮疣狀增生等種種不正常的病變，統稱為「口腔癌前病症」。台灣自民國88年開始進行口腔癌篩檢後，追蹤癌前病症患者以杜絕其病灶惡性轉換為口腔癌，是臨床上一件重要卻負荷不輕的使命。最新結合一萬六千多位患者的追蹤資料顯示，各型的口腔癌前病症其惡性轉癌風險並不相同 (十年內5–68%)，如何及早將高危險群患者鑑定出來，且於未惡性轉換前施予有效之化學預防療程，是口腔癌篩檢計畫中最後、也是最重要一哩路。此外，儘管國外有一些進行頭頸癌癌前病症的化學預防研究，但其病因多與抽煙與喝酒有關，缺少本土性口腔癌「檳榔」因子，是否適用於國人實屬未知。本計畫乃基於這兩個迫切的議題，深入探討檳榔鹼對人類口腔角質細胞的癌變初始化機制，將其與精準分子診斷技術結合，以產出能轉譯於臨床上口腔癌前病症患者之風險評估及預防措施，以降低國人口腔癌罹患率暨提升患者存活率。 先前成果 免疫基因體學之進展日新月異，實驗室先前以CIBERSORT等免疫生物資訊演算程式，針對NCKU OrCA 40TN之80例組織，進行22種免疫細胞分析，發現40例鄰近正常組織內其 resting CD4 memory T 顯著地較40例腫瘤組織為高 (p = 5.05e-08); 而 activated dendritic cells 則顯著地降低 (p = 4.96e-07)。另外，多項新穎指數計算程式，可有效將四十對檢體加以分類，且與病人整體存活率具顯著關聯性，此份資料庫將成為日後研究口腔癌前病症最佳之腫瘤對照組。 為探討檳榔鹼誘導口腔角質細胞惡性病變之分子機轉，實驗室先前以低於致死劑量之檳榔鹼重複刺激人類口腔上皮細胞五十次以上，建立三對檳榔鹼有無處理之細胞株配對 (CTRL/AC)，並已完成全轉錄體定序分析，這些材料將成為本計畫中檳榔鹼與癌前病症惡性轉化研究之細胞模型。 milestones and contents 110 111 112 113 milestones intrinsic factors responsible for immune escape are
2020/01/09 Journal Club and 2020/01/05 MOST109 Read More »